Scalable Modeling · Imaging · Learning

We make complex data learnable.

SMILE develops efficient models, algorithms, and systems that turn large-scale scientific data into insight—from whole-slide images to molecular graphs.

Led by Prof. Junzhou Huang · The University of Texas at Arlington

400+faculty publications
10current Ph.D. students
5research directions
50+open-source repositories

Selected work

Ideas in motion.

A selection from the lab’s work across multimodal learning, pathology, graph learning, and AI for biology.

Publication archive
2026

Multi-modal Analysis of Whole Slide Images in Colorectal Cancer

Jitendra Jonnagaddala, Miljana Shulajkovska, Anton Gradisek, Toni Jue, Qifeng Zhou, Yuzhi Guo, Jamil Chayeb, Rujiang Li, Jana Lipkvoa, Jakob Kather and Junzhou Huang

NPJ Digital Medicine , To Appear. · journal

2026

Deciphering Small Sequence Differences in T cell Receptor-Antigen Pairing

Yi Han, Yuqiu Yang, James Zhu, Farjana J. Fattah, Mitchell S. von Itzstein, Minying Zhang, Casey Bermack, Peixin Jiang, Shailbala Singh, Yanhua Tian, Yifei Hu, Yafang Deng, Xiongbin Kang, Donghan M. Yang, Jialiang Liu, Yaming Xue, Chaoying Liang, Indu Raman, Chengsong Zhu, Olivia Xiao, Jonathan E. Dowell, Jade Homsi, Sawsan Rashdan, Ke Pan, Shengjie Yang, Mary E. Gwin, David Hsiehchen, Yvonne Gloria-McCutchen, Fangjiang Wu, John V. Heymach, Don Gibbons, Junzhou Huang , Chao Cheng, Jianjun Zhang, Cassian Yee, Alexandre Reuben, David E. Gerber and Tao Wang

Nature Communications , June 2026. · journal

2026

Histopathology Multi-modal Embedding for Pathology Composed Retrieval

Qifeng Zhou, Wenliang Zhong, Thao M. Dang, Hehuan Ma, Saiyang Na, Yuzhi Guo and Junzhou Huang

In Proc. of the 19th European Conference on Computer Vision , ECCV'26, Malmö, Sweden, September 2026. · conference

2026

Hyperbolic Gramian Volumes for Multimodal Alignment

Saiyang Na, Feng Jiang, Qifeng Zhou, Wenliang Zhong, Thao M. Dang, Yuzhi Guo, Hehuan Ma, Chunyuan Li, Weizhi An and Junzhou Huang

In Proc. of IEEE Conference on Computer Vision and Pattern Recognition , CVPR'26, Denver, Colorado, USA, June 2026. · conference

People

Meet the lab.

Meet everyone
YM

Yuwei Miao

Ph.D. Student · Since 2022

Machine learningBioinformatics
QZ

Qifeng Zhou

Ph.D. Student · Since 2022

Computational pathologyMultimodal learning
TM

Thao M. Dang

Ph.D. Student · Since 2023

Medical imagingRepresentation learning
JY

Jingquan Yan

Ph.D. Student · Since 2024

Machine learningAI for biology

Latest

News from SMILE.

New papers, collaborations, awards, and milestones from the lab.

Received an NIH R01 grant $3,073,150 to study Gene/Drug Synergy!
Received a grant $200,000 from Johnson & Johnson for AI based Virtual Cell!
One paper was accepted by ECCV 2026. Congrats to Qifeng!
One paper on TCR-Antigen Pairing was published in Nature Communications !

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